Gene Symbol | Gene name | Fold change RNA-Seq | Fold change exon arrays |
---|---|---|---|
Genes upregulated after SNT | |||
Aif1/Iba-1 | Allograft inflammatory factor 1 (Iba-1) | 4.7 | 2.0 |
Apoe | Apoliprotein E | 1.5 (ns) | 1.2 |
Arg1 | Arginase, liver | 30.1 | 2.4 |
Arpc1b | Actin related protein 2/3 complex, subunit 1B, 41 kDa | 3.7 | 2.7 |
Atf3 | Activating transcription factor 3 | 33.8 | 13.7 |
C1qb | Complement component 1, q subcomponent, B chain | 10.1 | 5.5 |
C1qc | Complement component 1, q subcomponent, C chain | 7.7 | 4.5 |
C1s | Complement component 1, s subcomponent | 4.4 | 2.5 |
Cacna2d1 | Calcium channel, voltage-dependent, alpha 2/delta subunit 1 | 5.0 | 3.0 |
Ccl2 | Chemokine (C-C motif) ligand 2 | 2.1 | 1.4 |
Ccnd1 | Cyclin D1 | 4.1 | 2.7 |
Cd74 | CD74 molecule, major histocompatibility complex, class II invariant chain | 6.5 | 2.8 |
Coro1a | Coronin 1-A | 1.0 (ns) | 1.2 (ns) |
Crabp2 | Cellular retinoic acid-binding protein 2 | 3.1 | 2.1 |
Csrp3 | Cysteine and glycine-rich protein 3 (cardiac LIM protein) | 590.2 | 22.6 |
Ctsd | Cathepsin D precursor | 1.4 (ns) | 1.3 |
Ctsh | Cathepsin H | 1.6 | 1.3 (ns) |
Cxcl10 | Chemokine (C-X-C motif) ligand 10 | 7.5 | 3.8 |
Cxcl13 | Chemokine (C-X-C motif) ligand 13 | 4.0 | 2.2 |
Egr1 | Early growth response 1 | 2.2 | 1.8 |
Gabra5 | Gamma-aminobutyric acid (GABA) A receptor, alpha 5 | 2. 5 | 2.1 |
Gadd45a | Growth arrest and DNA-damage-inducible, alpha | 6.8 | 4.6 |
Gal | Galanin/GMAP prepropeptide | 46.3 | 13.5 |
Gap43 | Growth associated protein 43 | 3.2 | 2.3 |
Gfap | Glial fibrillary acidic protein | 8.8 | 3.8 |
Gfra1 | GDNF family receptor alpha 1 | 3.2 | 2.1 |
Igfbp3 | Insulin-like growth factor binding protein 3 | 4.7 | 2.9 |
Igfbp6 | Insulin-like growth factor binding protein 6 | 1.8 | 1.5 |
Lum | Lumican | 2.5 | 1.6 |
Npy | Neuropeptide Y | Not detected | 7.8 |
Reg3b | Regenerating islet-derived 3 beta | 61.0 | 20.1 |
S100a4 | S100 calcium binding protein A4 | 2.8 | 1.9 |
Sprr1a | Small proline-rich protein 1A/cornifin-1 | 176.6 | 57.9 |
Stmn4 | Stathmin-like 4 | 6.1 | 3.2 |
Timp1 | TIMP metallopeptidase inhibitor 1 | 3.5 | 2.1 |
Vgf | VGF nerve growth factor inducible | 5.3 | 2.5 |
Vip | Vasoactive intestinal peptide | 138.1 | 5.4 |
Genes downregulated after SNT | |||
Atp1b3* | ATPase, Na+/K + transporting, beta 3 polypeptide | 0.6 | 0.8 |
Calca* | Calcitonin-related polypeptide alpha | 0.3 | 0.4 |
Cd55 | CD55 molecule, decay accelerating factor for complement | 0.2 | 0.3 |
Chrna3 | Cholinergic receptor, nicotinic, alpha 3 (neuronal) | 0.1 | 0.1 |
Ckmt1 | Creatine kinase, mitochondrial 1, ubiquitous | 0.2 | 0.3 |
Gabbr1 | Gamma-aminobutyric acid (GABA) B receptor, 1 | 0.8 | 0.8 (ns) |
Grik1 | Glutamate receptor, ionotropic, kainate 1 | 0.2 | 0.1 |
Htr3a | 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic | 0.1 | 0.1 |
Kcnc2 | Potassium voltage-gated channel, Shaw-related subfamily, member 2 | 0.3 | 0.5 |
Nefh | Neurofilament, heavy polypeptide | 0.3 | 0.4 |
Nefl | Neurofilament, light polypeptide | 0.2 | 0.5 |
Nefm | Neurofilament, medium polypeptide | 0.3 | 0.5 |
Nsf | N-ethylmaleimide-sensitive factor | 0.5 | 0.5 |
Rab3a | RAB3A, member RAS oncogene family | 0.3 | 0.4 |
Rgs4 | Regulator of G-protein signaling 4 | 0.2 | 0.2 |
Scn11a | Sodium channel, voltage-gated, type XI, alpha subunit | 0.1 | 0.1 |
Snap25 | Synaptosomal-associated protein, 25 kDa | 0.3 | 0.6 |
Sst* | Somatostatin | 0.1 | 0.1 |
Sv2b | Synaptic vesicle glycoprotein 2B | 0.3 | 0.3 |
Tac1* | Tachykinin, precursor 1 | 0.3 | 0.3 |
Vsnl1 | Visinin-like 1 | 0.2 | 0.3 |
Ywhag | Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma polypeptide | 0.5 | 0.7 |