Skip to main content

Table 2 Frequent haploblocks of GCH1 in European Americans

From: Lack of influence of GTP cyclohydrolase gene (GCH1) variations on pain sensitivity in humans

Haplotype   Frequency
Haploblock 1 A_G_T_C 0.55
  A_G_C_C 0.25
  T_A_C_T 0.17
  total 0.98
Haploblock 2 A_A_T_C_C 0.55
  G_T_C_T_G 0.18
  G_A_T_T_C 0.17
  G_A_T_C_C 0.09
  total 0.99
Haploblock 3 G_C_G_T_C_A_C_G_G_A_A_C_T_T_G_G_C_T_A_C_A_A_T_C_G_C_G_C_C 0.29
  G_C_A_T_C_G_C_G_C_A_A_C_C_T_C_A_C_A_C_T_G_G_C_T_A_T_G_G_T 0.19
  G_T_G_C_A_A_T_A_C_G_G_A_C_C_G_G_C_T_A_C_A_A_T_C_G_C_T_C_C 0.15
  G_C_G_T_C_A_C_G_G_A_A_C_T_T_G_A_A_T_A_C_A_A_C_T_G_C_G_C_C 0.06
  A_C_G_T_C_A_C_G_G_A_A_C_T_T_G_G_C_T_A_C_A_A_T_C_G_C_T_C_C 0.20
  total 0.88
Tag SNPs A_T_C_A_A_C_G_C_G_G_G_G 0.28
  A_T_C_A_A_C_A_C_G_G_G_T 0.19
  T_C_T_G_T_T_G_C_A_C_A_G 0.16
  A_C_C_G_A_T_G_T_G_C_G_T 0.15
  A_C_C_G_A_C_G_C_G_G_A_G 0.08
  total 0.87