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Table 2 Frequent haploblocks of GCH1 in European Americans

From: Lack of influence of GTP cyclohydrolase gene (GCH1) variations on pain sensitivity in humans

Haplotype

 

Frequency

Haploblock 1

A_G_T_C

0.55

 

A_G_C_C

0.25

 

T_A_C_T

0.17

 

total

0.98

Haploblock 2

A_A_T_C_C

0.55

 

G_T_C_T_G

0.18

 

G_A_T_T_C

0.17

 

G_A_T_C_C

0.09

 

total

0.99

Haploblock 3

G_C_G_T_C_A_C_G_G_A_A_C_T_T_G_G_C_T_A_C_A_A_T_C_G_C_G_C_C

0.29

 

G_C_A_T_C_G_C_G_C_A_A_C_C_T_C_A_C_A_C_T_G_G_C_T_A_T_G_G_T

0.19

 

G_T_G_C_A_A_T_A_C_G_G_A_C_C_G_G_C_T_A_C_A_A_T_C_G_C_T_C_C

0.15

 

G_C_G_T_C_A_C_G_G_A_A_C_T_T_G_A_A_T_A_C_A_A_C_T_G_C_G_C_C

0.06

 

A_C_G_T_C_A_C_G_G_A_A_C_T_T_G_G_C_T_A_C_A_A_T_C_G_C_T_C_C

0.20

 

total

0.88

Tag SNPs

A_T_C_A_A_C_G_C_G_G_G_G

0.28

 

A_T_C_A_A_C_A_C_G_G_G_T

0.19

 

T_C_T_G_T_T_G_C_A_C_A_G

0.16

 

A_C_C_G_A_T_G_T_G_C_G_T

0.15

 

A_C_C_G_A_C_G_C_G_G_A_G

0.08

 

total

0.87