Table 2 Biased upregulated and downregulated transcripts in SNI with known brain-specific functions
Gene | Chr | Start | End | p-Value | Log2fold change |
|---|---|---|---|---|---|
Calcium-activated chloride channel regulator 1* | 3 | 144409728 | 144409992 | 4.95E-04 | −3.19 |
Solute carrier family 14 (urea transporter), member 1 | 18 | 78308093 | 78308285 | 2.90E-06 | −2.37 |
Gamma-aminobutyric acid receptor subunit gamma-1 | 5 | 71185885 | 71185952 | 8.90E-05 | −2.17 |
Activating transcription factor 3 | 1 | 192994175 | 192995558 | 8.97E-07 | −1.98 |
Fatty acid binding protein 7 | 10 | 57505312 | 57505484 | 4.36E-12 | −1.44 |
Gamma-aminobutyric acid receptor subunit gamma-3 | 7 | 64433752 | 64435107 | 3.29E-04 | −1.38 |
Glial fibrillary acidic protein * | 11 | 102753225 | 102753268 | 2.40E-04 | −1.24 |
Fos | 12 | 86816542 | 86816649 | 4.62E-04 | −0.90 |
Dopamine receptor D2 | 9 | 49215006 | 49216282 | 1.44E-05 | −0.88 |
X-linked lymphocyte-regulated 4B * | X | 70463702 | 70467280 | 1.72E-03 | 3.87 |
Lipopolysaccharide-binding protein* | 2 | 158139209 | 158139364 | 3.31E-04 | 2.54 |
Protein regulator of cytokinesis 1 | 7 | 87460000 | 87461144 | 5.70E-05 | 2.40 |
Cut-like homeobox 1 | 5 | 137041250 | 137041567 | 1.46E-04 | 2.24 |
Roundabout, axon guidance receptor, homolog 3* | 9 | 37227254 | 37227393 | 1.51E-05 | 1.96 |
Sodium channel, voltage-gated, type I, alpha subunit* | 2 | 66166462 | 66166603 | 4.34E-04 | 1.10 |
Synaptotagmin-2* | 1 | 136644052 | 136649726 | 9.10E-09 | 0.91 |
Synapsin 1 | X | 20497539 | 20498130 | 1.72E-03 | 0.59 |
Glutamate [NMDA] receptor subunit zeta-1* | 2 | 25174149 | 25174615 | 3.31E-04 | 0.57 |